Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Gm5523-201ENSMUST00000180415 997 ntBASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Mir7032-201ENSMUST00000185154 79 ntBASIC10.9□□□□□ -0.66
Crlf1Q9JM58 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Gm8099-201ENSMUST00000200510 742 ntBASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Crlf1Q9JM58 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Crlf1Q9JM58 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.9□□□□□ -0.67
Crlf1Q9JM58 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Crlf1Q9JM58 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Crlf1Q9JM58 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.9□□□□□ -0.67
Crlf1Q9JM58 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Crlf1Q9JM58 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm11439-201ENSMUST00000118598 409 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm2231-201ENSMUST00000125661 612 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm7809-201ENSMUST00000153199 742 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm29608-201ENSMUST00000190444 463 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gm8959-201ENSMUST00000213150 571 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 AC154595.3-201ENSMUST00000224579 384 ntBASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Crlf1Q9JM58 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Gm14277-201ENSMUST00000121195 360 ntBASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC10.88□□□□□ -0.67
Crlf1Q9JM58 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms