Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Tubb3Q9ERD7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Tubb3Q9ERD7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Gm15957-201ENSMUST00000118893 974 ntBASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Tubb3Q9ERD7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Gm15321-201ENSMUST00000121290 288 ntBASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Gm5186-201ENSMUST00000218781 920 ntBASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Gm20445-201ENSMUST00000061905 565 ntBASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Tubb3Q9ERD7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Tubb3Q9ERD7 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms