Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Gm1335-201ENSMUST00000121653 386 ntBASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cpsf1Q9EPU4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Gm38002-201ENSMUST00000193255 180 ntBASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Gm17823-201ENSMUST00000217830 1006 ntBASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Cpsf1Q9EPU4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Gm43423-201ENSMUST00000198390 2094 ntBASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Gm38049-201ENSMUST00000195698 1372 ntBASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cpsf1Q9EPU4 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Gm19184-201ENSMUST00000196798 928 ntBASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Gm42853-201ENSMUST00000201273 1387 ntBASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Mir8109-201ENSMUST00000184375 117 ntBASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC18.57■□□□□ 0.56
Cpsf1Q9EPU4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Gm5940-201ENSMUST00000117582 1068 ntBASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 AC135669.1-202ENSMUST00000216742 540 ntBASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 AC133598.1-201ENSMUST00000224327 660 ntBASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Il17rd-203ENSMUST00000225146 3366 ntBASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Gm7399-201ENSMUST00000032395 858 ntBASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cpsf1Q9EPU4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms