Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hmgn3Q9DCB1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Gm29741-201ENSMUST00000192667 421 ntBASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hmgn3Q9DCB1 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hmgn3Q9DCB1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Hmgn3Q9DCB1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Mir874-201ENSMUST00000104769 76 ntBASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Mir5126-201ENSMUST00000175513 77 ntBASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Hmgn3Q9DCB1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms