Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hmg20aQ9DC33 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm21362-201ENSMUST00000194272 928 ntBASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm6376-201ENSMUST00000209407 580 ntBASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm7787-201ENSMUST00000216858 688 ntBASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Birc2-201ENSMUST00000054878 378 ntBASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hmg20aQ9DC33 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Matn2-203ENSMUST00000226766 3252 ntBASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hmg20aQ9DC33 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Hmg20aQ9DC33 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms