Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk3bl1Q9D701 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm16107-201ENSMUST00000162523 862 ntBASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm45696-201ENSMUST00000212088 985 ntBASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Gm14667-201ENSMUST00000119448 1350 ntBASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk3bl1Q9D701 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC12.42□□□□□ -0.42
Upk3bl1Q9D701 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms