Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Nupl1-207ENSMUST00000225311 2475 ntBASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC9.08□□□□□ -0.96
Mrpl55Q9CZ83 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm43205-201ENSMUST00000198622 1968 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Mir6956-201ENSMUST00000183598 62 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm7774-201ENSMUST00000200064 533 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 AC159114.1-201ENSMUST00000220349 266 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 AC140397.2-201ENSMUST00000224213 834 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Gm20633-201ENSMUST00000176742 2831 ntBASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Mrpl55Q9CZ83 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Fgf17-202ENSMUST00000227123 1336 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Gm12626-201ENSMUST00000117339 1983 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Gm12623-201ENSMUST00000119849 1983 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Gm13616-201ENSMUST00000120600 222 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Gm43474-201ENSMUST00000196415 774 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 AC139382.1-201ENSMUST00000221402 498 ntBASIC9.06□□□□□ -0.96
Mrpl55Q9CZ83 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms