Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Olfr284-202ENSMUST00000206647 966 ntBASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nip7Q9CXK8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.89■□□□□ 0.3
Nip7Q9CXK8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Gm44364-201ENSMUST00000198368 141 ntBASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Gm43758-201ENSMUST00000199500 367 ntBASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nip7Q9CXK8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Gm9368-201ENSMUST00000219348 831 ntBASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.88■□□□□ 0.29
Nip7Q9CXK8 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Cts7-204ENSMUST00000225321 1257 ntBASIC16.88■□□□□ 0.29
Nip7Q9CXK8 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Nip7Q9CXK8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Nip7Q9CXK8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms