Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Chchd1-203ENSMUST00000224633 557 ntBASIC16.05■□□□□ 0.16
Smc3Q9CW03 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Smc3Q9CW03 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Mir449b-201ENSMUST00000104833 80 ntBASIC16.04■□□□□ 0.16
Smc3Q9CW03 Gm15653-201ENSMUST00000119247 907 ntBASIC16.04■□□□□ 0.16
Smc3Q9CW03 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.04■□□□□ 0.16
Smc3Q9CW03 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.04■□□□□ 0.16
Smc3Q9CW03 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Smc3Q9CW03 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Gm15693-201ENSMUST00000120470 637 ntBASIC16.03■□□□□ 0.16
Smc3Q9CW03 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Gm27622-201ENSMUST00000183779 60 ntBASIC16.03■□□□□ 0.16
Smc3Q9CW03 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Smc3Q9CW03 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.02■□□□□ 0.16
Smc3Q9CW03 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.02■□□□□ 0.16
Smc3Q9CW03 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Smc3Q9CW03 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Gm8927-201ENSMUST00000181978 981 ntBASIC16.02■□□□□ 0.16
Smc3Q9CW03 Gm5312-201ENSMUST00000203728 547 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms