Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Otud1Q9CUB6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Gm2495-201ENSMUST00000191160 466 ntBASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Otud1Q9CUB6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Gm15429-201ENSMUST00000151268 798 ntBASIC12.9□□□□□ -0.34
Otud1Q9CUB6 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Otud1Q9CUB6 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.9□□□□□ -0.34
Otud1Q9CUB6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Otud1Q9CUB6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Otud1Q9CUB6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms