Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Gm11222-201ENSMUST00000119005 738 ntBASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Gm8584-201ENSMUST00000171982 758 ntBASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Gm44069-201ENSMUST00000204898 506 ntBASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cldnd1Q9CQX5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm16479-201ENSMUST00000121706 932 ntBASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm24990-201ENSMUST00000157406 323 ntBASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm19163-201ENSMUST00000223313 780 ntBASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cldnd1Q9CQX5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Gm26185-201ENSMUST00000157692 266 ntBASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Mir6979-201ENSMUST00000183927 56 ntBASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.86□□□□□ -0.19
Cldnd1Q9CQX5 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms