Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
RTRAFQ9CQE8 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm14859-201ENSMUST00000117752 357 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm10275-202ENSMUST00000168697 495 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm2445-201ENSMUST00000182798 989 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm45167-201ENSMUST00000208007 322 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm10275-201ENSMUST00000092620 635 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.06□□□□□ -0.64
RTRAFQ9CQE8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms