Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm7666-201ENSMUST00000146631 819 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Cdh23Q99PF4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Gm5070-201ENSMUST00000177599 862 ntBASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Cdh23Q99PF4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm13996-201ENSMUST00000118456 430 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm15131-201ENSMUST00000119124 595 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Rmrp-201ENSMUST00000157463 271 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 AL732506.1-201ENSMUST00000226420 281 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Ntng1-201ENSMUST00000051253 327 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Gm13875-201ENSMUST00000120162 282 ntBASIC13.55□□□□□ -0.24
Cdh23Q99PF4 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdh23Q99PF4 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Mir698-201ENSMUST00000102164 109 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms