Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Gm16476-201ENSMUST00000221544 139 ntBASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Rnf111Q99ML9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Mir1897-201ENSMUST00000122581 272 ntBASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.24□□□□□ -0.29
Rnf111Q99ML9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Gm25144-201ENSMUST00000179561 110 ntBASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Gm25352-201ENSMUST00000179815 110 ntBASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Gm2445-201ENSMUST00000182798 989 ntBASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.23□□□□□ -0.29
Rnf111Q99ML9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Rnf111Q99ML9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rnf111Q99ML9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms