Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Chmp1b1Q99LU0 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm14767-201ENSMUST00000121559 586 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm38294-201ENSMUST00000192831 381 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm44344-201ENSMUST00000200287 129 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Chmp1b1Q99LU0 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Gm14057-201ENSMUST00000120631 482 ntBASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Gm27618-201ENSMUST00000183671 60 ntBASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Gm37714-201ENSMUST00000194742 342 ntBASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Chmp1b1Q99LU0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Chmp1b1Q99LU0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms