Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Mir6392-201ENSMUST00000184924 108 ntBASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdha9Q91Y11 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm12403-201ENSMUST00000121384 959 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Mir7654-201ENSMUST00000185082 70 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm38144-201ENSMUST00000192790 465 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm18307-201ENSMUST00000206864 949 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gm45668-201ENSMUST00000211271 493 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdha9Q91Y11 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdha9Q91Y11 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms