Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Pcdhb2Q91Y00 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 AC168058.1-201ENSMUST00000219521 2282 ntBASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Gm15770-201ENSMUST00000117498 584 ntBASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Pcdhb2Q91Y00 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gm11918-201ENSMUST00000121660 179 ntBASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gm9908-201ENSMUST00000211534 448 ntBASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhb2Q91Y00 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb2Q91Y00 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms