Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gm38144-201ENSMUST00000192790 465 ntBASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb22Q91XZ8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Gm18018-201ENSMUST00000198273 408 ntBASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb22Q91XZ8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gm38223-201ENSMUST00000194484 695 ntBASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdhb22Q91XZ8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms