Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhga6Q91XY2 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gm15236-201ENSMUST00000117309 379 ntBASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Pcdhga6Q91XY2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Gm14723-201ENSMUST00000118686 215 ntBASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Gm18905-201ENSMUST00000205454 928 ntBASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhga6Q91XY2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhga6Q91XY2 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms