Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trex1Q91XB0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trex1Q91XB0 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trex1Q91XB0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trex1Q91XB0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trex1Q91XB0 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trex1Q91XB0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trex1Q91XB0 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.56■□□□□ 0.08
Trex1Q91XB0 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Gm11618-201ENSMUST00000117946 267 ntBASIC15.56■□□□□ 0.08
Trex1Q91XB0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Gm10268-201ENSMUST00000085340 555 ntBASIC15.56■□□□□ 0.08
Trex1Q91XB0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trex1Q91XB0 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm10146-201ENSMUST00000072739 309 ntBASIC15.55■□□□□ 0.08
Trex1Q91XB0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.55■□□□□ 0.08
Trex1Q91XB0 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.55■□□□□ 0.08
Trex1Q91XB0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.54■□□□□ 0.08
Trex1Q91XB0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm7029-201ENSMUST00000173226 450 ntBASIC15.54■□□□□ 0.08
Trex1Q91XB0 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm38002-201ENSMUST00000193255 180 ntBASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm37008-201ENSMUST00000195712 319 ntBASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.54■□□□□ 0.08
Trex1Q91XB0 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm16372-201ENSMUST00000073088 450 ntBASIC15.54■□□□□ 0.08
Trex1Q91XB0 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trex1Q91XB0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms