Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Usp3Q91W36 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Usp3Q91W36 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Gm15770-201ENSMUST00000117498 584 ntBASIC14.04□□□□□ -0.16
Usp3Q91W36 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Gm9723-201ENSMUST00000192100 457 ntBASIC14.04□□□□□ -0.16
Usp3Q91W36 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.04□□□□□ -0.16
Usp3Q91W36 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.04□□□□□ -0.16
Usp3Q91W36 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Usp3Q91W36 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Usp3Q91W36 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Gm15429-201ENSMUST00000151268 798 ntBASIC14.03□□□□□ -0.16
Usp3Q91W36 Gm28923-201ENSMUST00000187755 322 ntBASIC14.03□□□□□ -0.16
Usp3Q91W36 Gm38223-201ENSMUST00000194484 695 ntBASIC14.03□□□□□ -0.16
Usp3Q91W36 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp3Q91W36 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Usp3Q91W36 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp3Q91W36 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Usp3Q91W36 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp3Q91W36 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Usp3Q91W36 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms