Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.12□□□□□ -0.15
Trim60Q8VI40 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trim60Q8VI40 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Gm9229-201ENSMUST00000222777 126 ntBASIC14.11□□□□□ -0.15
Trim60Q8VI40 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.11□□□□□ -0.15
Trim60Q8VI40 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim60Q8VI40 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.11□□□□□ -0.15
Trim60Q8VI40 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.1□□□□□ -0.15
Trim60Q8VI40 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.1□□□□□ -0.15
Trim60Q8VI40 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.1□□□□□ -0.15
Trim60Q8VI40 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trim60Q8VI40 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.1□□□□□ -0.15
Trim60Q8VI40 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim60Q8VI40 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm8410-201ENSMUST00000117225 605 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm6736-201ENSMUST00000166583 948 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm8927-201ENSMUST00000181978 981 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm2756-201ENSMUST00000195851 400 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm3222-201ENSMUST00000071282 990 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.09□□□□□ -0.15
Trim60Q8VI40 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim60Q8VI40 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms