Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Sf3a1Q8K4Z5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sf3a1Q8K4Z5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Sf3a1Q8K4Z5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Gm19078-201ENSMUST00000206311 727 ntBASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Sf3a1Q8K4Z5 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm14730-201ENSMUST00000122378 1045 ntBASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm7498-201ENSMUST00000203282 1084 ntBASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.69■□□□□ 0.26
Sf3a1Q8K4Z5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Gm37917-201ENSMUST00000194711 392 ntBASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Sf3a1Q8K4Z5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Gm11524-201ENSMUST00000119349 807 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Gm15376-201ENSMUST00000122258 783 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Gm26464-201ENSMUST00000157094 305 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Gm18624-201ENSMUST00000220966 658 ntBASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Sf3a1Q8K4Z5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms