Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC8.59□□□□□ -1.03
Cystm1Q8K353 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cystm1Q8K353 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Cystm1Q8K353 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 AC119177.1-201ENSMUST00000227647 1332 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Gm14822-201ENSMUST00000122247 291 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Gm27494-201ENSMUST00000184735 189 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 AC147366.1-201ENSMUST00000227671 852 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Mxra8os-201ENSMUST00000097740 687 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Gm38385-201ENSMUST00000194454 2351 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Grk6-207ENSMUST00000225925 2769 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Gm9544-201ENSMUST00000223349 2482 ntBASIC8.58□□□□□ -1.04
Cystm1Q8K353 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cystm1Q8K353 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC8.57□□□□□ -1.04
Cystm1Q8K353 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Cystm1Q8K353 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms