Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Gm10146-201ENSMUST00000072739 309 ntBASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Shtn1Q8K2Q9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Gm29396-201ENSMUST00000185659 716 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Gm37497-201ENSMUST00000195830 798 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Rn7sk-201ENSMUST00000083103 331 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Gm26315-201ENSMUST00000083890 321 ntBASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Shtn1Q8K2Q9 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Gm12176-201ENSMUST00000121420 875 ntBASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Gm8227-201ENSMUST00000223306 571 ntBASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Shtn1Q8K2Q9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Shtn1Q8K2Q9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Gm12241-201ENSMUST00000118330 726 ntBASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Gm2991-201ENSMUST00000173338 480 ntBASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Gm26927-201ENSMUST00000182385 965 ntBASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Shtn1Q8K2Q9 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Shtn1Q8K2Q9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms