Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim68Q8K243 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim68Q8K243 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim68Q8K243 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim68Q8K243 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm10275-202ENSMUST00000168697 495 ntBASIC14.82□□□□□ -0.04
Trim68Q8K243 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm7561-201ENSMUST00000211203 886 ntBASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm10275-201ENSMUST00000092620 635 ntBASIC14.82□□□□□ -0.04
Trim68Q8K243 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.82□□□□□ -0.04
Trim68Q8K243 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim68Q8K243 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim68Q8K243 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm8463-201ENSMUST00000208573 613 ntBASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim68Q8K243 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.81□□□□□ -0.04
Trim68Q8K243 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim68Q8K243 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trim68Q8K243 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim68Q8K243 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Trim68Q8K243 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim68Q8K243 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.8□□□□□ -0.04
Trim68Q8K243 Gm11814-201ENSMUST00000119515 929 ntBASIC14.8□□□□□ -0.04
Trim68Q8K243 Gm15429-201ENSMUST00000151268 798 ntBASIC14.8□□□□□ -0.04
Trim68Q8K243 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim68Q8K243 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim68Q8K243 Gm27847-201ENSMUST00000183711 107 ntBASIC14.8□□□□□ -0.04
Trim68Q8K243 Gm27375-201ENSMUST00000183799 107 ntBASIC14.8□□□□□ -0.04
Trim68Q8K243 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms