Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm16372-201ENSMUST00000073088 450 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Gm8810-201ENSMUST00000172895 754 ntBASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rab11fip3Q8CHD8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Gm7553-201ENSMUST00000185805 1426 ntBASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Rab11fip3Q8CHD8 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.41
Rab11fip3Q8CHD8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Rab11fip3Q8CHD8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms