Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Mir7085-201ENSMUST00000184353 66 ntBASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm29741-201ENSMUST00000192667 421 ntBASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm17794-201ENSMUST00000220252 955 ntBASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rbm28Q8CGC6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Gm15429-201ENSMUST00000151268 798 ntBASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rbm28Q8CGC6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Gm8463-201ENSMUST00000208573 613 ntBASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rbm28Q8CGC6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbm28Q8CGC6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbm28Q8CGC6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbm28Q8CGC6 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rbm28Q8CGC6 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rbm28Q8CGC6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Rbm28Q8CGC6 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms