Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ccdc28bQ8CEG5 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm18737-201ENSMUST00000173594 937 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm29310-201ENSMUST00000185468 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21825-201ENSMUST00000185728 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm29109-201ENSMUST00000185895 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21896-201ENSMUST00000186520 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21873-201ENSMUST00000186728 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21794-201ENSMUST00000187056 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21880-201ENSMUST00000187275 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21826-201ENSMUST00000187451 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21198-201ENSMUST00000188393 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21749-201ENSMUST00000189343 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21901-201ENSMUST00000189568 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm29424-201ENSMUST00000189716 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm28599-201ENSMUST00000189838 694 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21867-201ENSMUST00000189917 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm29269-201ENSMUST00000190087 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21722-201ENSMUST00000190153 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm28423-201ENSMUST00000190701 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21899-201ENSMUST00000190745 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21910-201ENSMUST00000191163 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21849-201ENSMUST00000191571 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm28678-201ENSMUST00000191593 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm20910-201ENSMUST00000193268 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm21871-201ENSMUST00000194621 696 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 BC001981-202ENSMUST00000191393 1545 ntBASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ccdc28bQ8CEG5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Gm14140-201ENSMUST00000119999 995 ntBASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.46□□□□□ -0.25
Ccdc28bQ8CEG5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms