Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Gm43438-201ENSMUST00000198133 379 ntBASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nup88Q8CEC0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Gm8515-201ENSMUST00000194852 576 ntBASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.11■□□□□ 0.17
Nup88Q8CEC0 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Gm6180-201ENSMUST00000065243 498 ntBASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nup88Q8CEC0 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Gm14371-201ENSMUST00000138925 1518 ntBASIC16.1■□□□□ 0.17
Nup88Q8CEC0 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Gm45668-201ENSMUST00000211271 493 ntBASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Nup88Q8CEC0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Nup88Q8CEC0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms