Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm2231-201ENSMUST00000125661 612 ntBASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm43133-201ENSMUST00000197472 463 ntBASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm45930-201ENSMUST00000221330 292 ntBASIC16.73■□□□□ 0.27
Trim52Q8CDV4 AC154276.1-201ENSMUST00000228874 1299 ntBASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trim52Q8CDV4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Olfr582-201ENSMUST00000098212 960 ntBASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim52Q8CDV4 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.72■□□□□ 0.27
Trim52Q8CDV4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Gm11637-201ENSMUST00000120601 592 ntBASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim52Q8CDV4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trim52Q8CDV4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm11793-201ENSMUST00000120433 981 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm16479-201ENSMUST00000121706 932 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm6222-202ENSMUST00000182143 629 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm27501-201ENSMUST00000183599 107 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim52Q8CDV4 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms