Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vcpip1Q8CDG3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm8410-201ENSMUST00000117225 605 ntBASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm5866-201ENSMUST00000177881 973 ntBASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Mir497b-201ENSMUST00000093601 125 ntBASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.68□□□□□ -0.06
Vcpip1Q8CDG3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vcpip1Q8CDG3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Gm15460-201ENSMUST00000118147 391 ntBASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Gm9229-201ENSMUST00000222777 126 ntBASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Vcpip1Q8CDG3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms