Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Gm18766-201ENSMUST00000189811 808 ntBASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
Nhlrc3Q8CCH2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc3Q8CCH2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc3Q8CCH2 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Nhlrc3Q8CCH2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.52□□□□□ -0.56
Nhlrc3Q8CCH2 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Gm25911-201ENSMUST00000157621 56 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Gm9719-201ENSMUST00000162765 543 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Gm29541-201ENSMUST00000191351 678 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Nhlrc3Q8CCH2 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Gm5264-201ENSMUST00000190584 848 ntBASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nhlrc3Q8CCH2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms