Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc60Q8C4J0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC17.39■□□□□ 0.38
Ccdc60Q8C4J0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc60Q8C4J0 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Gm14752-201ENSMUST00000120719 2075 ntBASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.39■□□□□ 0.37
Ccdc60Q8C4J0 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Mir6392-201ENSMUST00000184924 108 ntBASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Gm5069-202ENSMUST00000192714 1011 ntBASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc60Q8C4J0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Gm45668-201ENSMUST00000211271 493 ntBASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ccdc60Q8C4J0 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms