Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Gm6222-201ENSMUST00000120787 396 ntBASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Gm18049-201ENSMUST00000208909 581 ntBASIC12.79□□□□□ -0.36
Vps9d1Q8C190 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps9d1Q8C190 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 BC001981-202ENSMUST00000191393 1545 ntBASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Gm25948-201ENSMUST00000175334 112 ntBASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Gm10253-201ENSMUST00000194270 940 ntBASIC12.78□□□□□ -0.36
Vps9d1Q8C190 AA619741-201ENSMUST00000195095 646 ntBASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vps9d1Q8C190 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vps9d1Q8C190 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Gm14057-201ENSMUST00000120631 482 ntBASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vps9d1Q8C190 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms