Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Mir7023-201ENSMUST00000185093 64 ntBASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.23□□□□□ -0.13
Sh3rf3Q8C120 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Gm15240-201ENSMUST00000118156 720 ntBASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Gm14719-201ENSMUST00000121891 340 ntBASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Mir8102-201ENSMUST00000184148 139 ntBASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sh3rf3Q8C120 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Mir7684-201ENSMUST00000183858 60 ntBASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sh3rf3Q8C120 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sh3rf3Q8C120 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sh3rf3Q8C120 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sh3rf3Q8C120 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms