Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm17330-201ENSMUST00000221047 165 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm12928-201ENSMUST00000117115 573 ntBASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm9002-201ENSMUST00000178437 499 ntBASIC15.1■□□□□ 0.01
Trim47Q8C0E3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm6983-201ENSMUST00000214912 628 ntBASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim47Q8C0E3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.09■□□□□ 0.01
Trim47Q8C0E3 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trim47Q8C0E3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim47Q8C0E3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Trim47Q8C0E3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trim47Q8C0E3 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trim47Q8C0E3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Trim47Q8C0E3 Mir692-1-201ENSMUST00000102263 109 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms