Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Gm22334-201ENSMUST00000158070 133 ntBASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Gm18212-201ENSMUST00000211678 889 ntBASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Gm15897-201ENSMUST00000117770 1486 ntBASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col16a1Q8BLX7 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Gm37133-201ENSMUST00000192705 1922 ntBASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Col16a1Q8BLX7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm14130-201ENSMUST00000118417 987 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm13665-201ENSMUST00000120830 528 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm34767-201ENSMUST00000191813 1062 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm43697-201ENSMUST00000199637 2581 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm15276-201ENSMUST00000145953 498 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm5950-201ENSMUST00000213337 772 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 AC154595.3-201ENSMUST00000224579 384 ntBASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Col16a1Q8BLX7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 Gm4366-201ENSMUST00000201488 1342 ntBASIC17.52■□□□□ 0.4
Col16a1Q8BLX7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms