Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm6916-202ENSMUST00000205523 195 ntBASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Mir497b-201ENSMUST00000093601 125 ntBASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Chmp2bQ8BJF9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Gm6443-201ENSMUST00000203599 874 ntBASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.98□□□□□ -0.17
Chmp2bQ8BJF9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Gm43474-201ENSMUST00000196415 774 ntBASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp2bQ8BJF9 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms