Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Slc5a7Q8BGY9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm7862-201ENSMUST00000121461 292 ntBASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm27459-201ENSMUST00000184860 107 ntBASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Slc5a7Q8BGY9 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Slc5a7Q8BGY9 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms