Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gm45612-201ENSMUST00000211320 160 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gm15823-201ENSMUST00000064305 670 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim6Q8BGE7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim6Q8BGE7 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Rprl2-201ENSMUST00000157150 290 ntBASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.47□□□□□ -0.09
Trim6Q8BGE7 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trim6Q8BGE7 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms