Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubp1Q811S7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.47□□□□□ -0.25
Ubp1Q811S7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Gm43275-201ENSMUST00000202053 1020 ntBASIC13.47□□□□□ -0.25
Ubp1Q811S7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ubp1Q811S7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Gm7488-201ENSMUST00000117148 684 ntBASIC13.46□□□□□ -0.25
Ubp1Q811S7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ubp1Q811S7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubp1Q811S7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ubp1Q811S7 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ubp1Q811S7 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ubp1Q811S7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms