Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh19Q80TF3 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm13829-201ENSMUST00000119600 138 ntBASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm18062-201ENSMUST00000208020 547 ntBASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm18055-201ENSMUST00000208254 547 ntBASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdh19Q80TF3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm13689-201ENSMUST00000119360 685 ntBASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm6266-201ENSMUST00000203844 806 ntBASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm8463-201ENSMUST00000208573 613 ntBASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm24447-201ENSMUST00000083977 338 ntBASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdh19Q80TF3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdh19Q80TF3 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms