Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm5279-201ENSMUST00000199575 745 ntBASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.31□□□□□ -0.12
Prpf38bQ80SY5 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm12384-201ENSMUST00000119228 919 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm27514-201ENSMUST00000183692 110 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm29649-201ENSMUST00000185649 419 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Prpf38bQ80SY5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Acot6-202ENSMUST00000222921 3622 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Mir5132-201ENSMUST00000175166 71 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Gm37714-201ENSMUST00000194742 342 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Gm38266-201ENSMUST00000194931 421 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Gm43822-201ENSMUST00000200285 476 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Gm7287-201ENSMUST00000205267 602 ntBASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Prpf38bQ80SY5 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms