Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm45331-201ENSMUST00000209868 554 ntBASIC12.62□□□□□ -0.39
Pif1Q80SX8 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm10478-201ENSMUST00000084451 396 ntBASIC12.62□□□□□ -0.39
Pif1Q80SX8 Mir497b-201ENSMUST00000093601 125 ntBASIC12.62□□□□□ -0.39
Pif1Q80SX8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pif1Q80SX8 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.61□□□□□ -0.39
Pif1Q80SX8 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm37424-201ENSMUST00000191727 561 ntBASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm42693-201ENSMUST00000196779 631 ntBASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.61□□□□□ -0.39
Pif1Q80SX8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.61□□□□□ -0.39
Pif1Q80SX8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.6□□□□□ -0.39
Pif1Q80SX8 Gm38223-201ENSMUST00000194484 695 ntBASIC12.6□□□□□ -0.39
Pif1Q80SX8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.6□□□□□ -0.39
Pif1Q80SX8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pif1Q80SX8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms