Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctdp1Q7TSG2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ctdp1Q7TSG2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctdp1Q7TSG2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctdp1Q7TSG2 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.9□□□□□ -0.02
Ctdp1Q7TSG2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctdp1Q7TSG2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gm15957-201ENSMUST00000118893 974 ntBASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gm38225-201ENSMUST00000194001 393 ntBASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctdp1Q7TSG2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm24158-201ENSMUST00000175263 71 ntBASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm10253-201ENSMUST00000194270 940 ntBASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm44872-201ENSMUST00000207864 420 ntBASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Gm45638-201ENSMUST00000211507 2878 ntBASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ctdp1Q7TSG2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ctdp1Q7TSG2 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Ctdp1Q7TSG2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms