Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm22175-201ENSMUST00000175007 78 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm27622-201ENSMUST00000183779 60 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm44608-201ENSMUST00000206827 855 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm18027-201ENSMUST00000218947 619 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.99□□□□□ -0.33
Otub1Q7TQI3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Otub1Q7TQI3 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.98□□□□□ -0.33
Otub1Q7TQI3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Gm37714-201ENSMUST00000194742 342 ntBASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.98□□□□□ -0.33
Otub1Q7TQI3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.98□□□□□ -0.33
Otub1Q7TQI3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Gm13616-201ENSMUST00000120600 222 ntBASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Otub1Q7TQI3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms