Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Vma21Q78T54 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Vma21Q78T54 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.11□□□□□ -0.63
Vma21Q78T54 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Vma21Q78T54 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Vma21Q78T54 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Dupd1-202ENSMUST00000224735 548 ntBASIC11.1□□□□□ -0.63
Vma21Q78T54 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.1□□□□□ -0.63
Vma21Q78T54 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Vma21Q78T54 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Vma21Q78T54 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.09□□□□□ -0.63
Vma21Q78T54 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.09□□□□□ -0.63
Vma21Q78T54 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Gm24158-201ENSMUST00000175263 71 ntBASIC11.09□□□□□ -0.63
Vma21Q78T54 Gm18766-201ENSMUST00000189811 808 ntBASIC11.09□□□□□ -0.63
Vma21Q78T54 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.09□□□□□ -0.63
Vma21Q78T54 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Vma21Q78T54 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms