Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Cspg5Q71M36 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.16□□□□□ -0.14
Cspg5Q71M36 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.16□□□□□ -0.14
Cspg5Q71M36 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.16□□□□□ -0.14
Cspg5Q71M36 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.15□□□□□ -0.14
Cspg5Q71M36 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Gm42693-201ENSMUST00000196779 631 ntBASIC14.15□□□□□ -0.14
Cspg5Q71M36 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 AC159896.2-201ENSMUST00000214753 269 ntBASIC14.15□□□□□ -0.14
Cspg5Q71M36 AC154319.1-201ENSMUST00000216330 312 ntBASIC14.15□□□□□ -0.14
Cspg5Q71M36 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 AL589735.1-201ENSMUST00000224353 270 ntBASIC14.15□□□□□ -0.14
Cspg5Q71M36 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cspg5Q71M36 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.15□□□□□ -0.15
Cspg5Q71M36 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cspg5Q71M36 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.15□□□□□ -0.15
Cspg5Q71M36 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 AL645783.1-201ENSMUST00000221416 1832 ntBASIC14.14□□□□□ -0.15
Cspg5Q71M36 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Gm13226-201ENSMUST00000117838 404 ntBASIC14.14□□□□□ -0.15
Cspg5Q71M36 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.14□□□□□ -0.15
Cspg5Q71M36 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cspg5Q71M36 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms