Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm25668-201ENSMUST00000157700 129 ntBASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm2383-201ENSMUST00000181461 807 ntBASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ddx55Q6ZPL9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Gm12363-201ENSMUST00000122250 668 ntBASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ddx55Q6ZPL9 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm12997-201ENSMUST00000120207 640 ntBASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm19163-201ENSMUST00000223313 780 ntBASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC15.42■□□□□ 0.06
Ddx55Q6ZPL9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.41■□□□□ 0.06
Ddx55Q6ZPL9 Gm18753-201ENSMUST00000201000 566 ntBASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms